FFCP PHASE1:Hg19::chr19:51891222..51891233,-
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| Short description: | p1@LIM2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_LIM2_5end |
| Coexpression cluster: | C369_Lens_eye_Ciliary_retina_H9_Retinal_Renal |
| Association with transcript: | -12bp_to_ENST00000221973, NM_001161748, NM_030657, uc002pwl.2, uc002pwm.2_5end |
| EntrezGene: | LIM2 |
| HGNC: | 6610 |
| UniProt: | P55344 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p1@LIM2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| crystallin accumulating cell | 5.48e-74 | 4 |
| vertebrate lens cell | 5.48e-74 | 4 |
| lens epithelial cell | 5.48e-74 | 4 |
| columnar/cuboidal epithelial cell | 4.52e-20 | 27 |
| basophil | 2.59e-12 | 3 |
| embryonic stem cell | 6.13e-08 | 5 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| cuboidal epithelium | 5.48e-74 | 4 |
| transparent eye structure | 5.48e-74 | 4 |
| simple cuboidal epithelium | 5.48e-74 | 4 |
| cranial placode | 5.48e-74 | 4 |
| lens of camera-type eye | 5.48e-74 | 4 |
| epithelium of lens | 5.48e-74 | 4 |
| lens placode | 5.48e-74 | 4 |
| lens vesicle | 5.48e-74 | 4 |
| external ectoderm | 1.51e-37 | 8 |
| pigment epithelium of eye | 1.40e-27 | 11 |
Showing 1 to 10 of 27 entries
